STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

 Search
    

E.coli K-12 (MG1655) Secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YMGJ_ECOLI
A5A612
ymgJ
b4594
periplasmic protein (SEC through IM), YmgJ
Periplasmic
G
IM (predicted)
 
-
 
 
SEC
 
 
no
yes
YJBT_ECOLI
A5A628
yjbT
b4620
periplasmic protein (SEC through IM), YjbT
Periplasmic
G
N/A
 
-
 
 
SEC
 
 
no
yes
SODM_ECOLI
P00448
sodA
b3908 JW3879
periplasmic protein (SEC through IM), Superoxide dismutase SodA
Periplasmic
G
N/A
 
Cytoplasmic
 
 
SEC
 
 
yes
yes
PPB_ECOLI
P00634
phoA
b0383 JW0374
periplasmic protein (SEC through IM), Alkaline phosphatase PhoA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
no
yes
ASPG2_ECOLI
P00805
ansB
b2957 JW2924
periplasmic protein (SEC through IM), L-asparaginase 2 AnsB
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
AMPC_ECOLI
P00811
ampC

ampA

b4150 JW4111
periplasmic protein (SEC through IM), Beta-lactamase AmpC
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
ARAF_ECOLI
P02924
araF
b1901 JW1889
periplasmic protein (SEC through IM), L-arabinose-binding periplasmic AraF
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
RBSB_ECOLI
P02925
rbsB

prlB rbsP

b3751 JW3730
periplasmic protein (SEC through IM), Ribose import binding RbsB
Periplasmic
G
Soluble IM Fraction
Periplasm
Periplasmic (Experimental)
 
 
SEC
SKP
 
no
yes
MALM_ECOLI
P03841
malM

molA

b4037 JW3997
periplasmic protein (SEC through IM), Maltose operon periplasmic protein MalM
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
LIVK_ECOLI
P04816
livK
b3458 JW3423
periplasmic protein (SEC through IM), Leucine-specific-binding LivK
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
yes
yes
PTRA_ECOLI
P05458
ptrA

ptr

b2821 JW2789
periplasmic protein (SEC through IM), Protease 3 PtrA
Periplasmic
G
N/A
Periplasm
Periplasmic(experimental)
 
 
SEC
SURA
 
yes
yes
CDH_ECOLI
P06282
cdh
b3918 JW3889
periplasmic protein (SEC through IM), CDP-diacylglycerol pyrophosphatase Cdh
Periplasmic
G
Soluble IM Fraction
Cell inner membrane; Single-pass membrane protein
Membrane anchored
 
 
SEC
 
 
yes
yes
USHA_ECOLI
P07024
ushA
b0480 JW0469
periplasmic protein (SEC through IM), UshA
Periplasmic
G
Soluble IM Fraction
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
PPA_ECOLI
P07102
appA
b0980 JW0963
periplasmic protein (SEC through IM), AppA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBC
 
yes
yes
FHUD_ECOLI
P07822
fhuD
b0152 JW0148
periplasmic protein (TAT-SEC through IM), Iron(3+)-hydroxamate-binding FhuD
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
TAT,SEC
 
 
yes
yes
CPDB_ECOLI
P08331
cpdB
b4213 JW4171
periplasmic protein (SEC through IM), 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CpdB
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
SURA
 
no
yes
YGDB_ECOLI
P08370
ygdB
b2824 JW5450
periplasmic protein (SEC through IM), YgdB
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
GLPQ_ECOLI
P09394
glpQ
b2239 JW2233
periplasmic protein (SEC through IM), Glycerophosphodiester phosphodiesterase, periplasmic GlpQ
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
ARGT_ECOLI
P09551
argT
b2310 JW2307
periplasmic protein (SEC through IM), Lysine/arginine/ornithine-binding periplasmic ArgT
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
FLGI_ECOLI
P0A6S3
flgI

fla FIX flaM

b1080 JW1067
Flagellar periplasmic protein (SEC through IM), P-ring FlgI
Periplasmic
G
N/A
Periplasm Bacterial flagellum basal body
Periplasmic (Experimental)
flagellum
SRP (exp)
SEC
DSBA
Fla
no
yes
1  2  3  4  5  6  7  8  9  10  11-16  Next  Last       Records 1 to 20 of 311     
Page Size 

 

 ©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: February 2019.