STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E.coli K-12 (MG1655) Secretome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E.coli K-12 (MG1655) Secretome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YDBJ_ECOLI
P0ACW2
ydbJ
b4529 JW5215
OM lipoprotein (SEC through IM, inserted in OM by LOL), YdbJ
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein
 
 
SEC
 
LOL
no
yes
YDCA_ECOLI
P0ACW4
ydcA
b1419 JW1416
periplasmic protein (SEC through IM), YdcA
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
no
yes
YFHG_ECOLI
P0AD44
yfhG
b2555 JW2539
OM lipoprotein (TAT-SEC through IM, inserted in OM by LOL), YfhG
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein
 
 
TAT,SEC
 
LOL
yes
yes
IVY_ECOLI
P0AD59
ivy

ykfE

b0220 JW0210
periplasmic protein (SEC through IM), Inhibitor of vertebrate lysozyme Ivy
Periplasmic
G
Soluble IM Fraction
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
yes
yes
LIVJ_ECOLI
P0AD96
livJ
b3460 JW3425
periplasmic protein (SEC through IM), Leu/Ile/Val-binding LivJ
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
DSBA
 
yes
yes
TESA_ECOLI
P0ADA1
tesA

apeA pldC

b0494 JW0483
periplasmic protein (SEC through IM), Thioesterase 1/protease 1/lysophospholipase L1 TesA
Periplasmic
G
N/A
Periplasm
Periplasmic (Experimental)
 
 
SEC
 
 
no
yes
NLPD_ECOLI
P0ADA3
nlpD
b2742 JW2712
OM lipoprotein (SEC through IM), inserted in OM by LOL), Murein hydrolase activator NlpD
Outer Membrane Lipoprotein
I
N/A
Cell inner membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YAJG_ECOLI
P0ADA5
yajG
b0434 JW0424
OM lipoprotein (SEC through IM, inserted in OM by LOL), YajG
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
OSMB_ECOLI
P0ADA7
osmB
b1283 JW1275
OM lipoprotein (SEC through IM), inserted in OM by LOL), Osmotically-inducible B OsmB
Outer Membrane Lipoprotein
I
N/A
Cell membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
OSME_ECOLI
P0ADB1
osmE

anr

b1739 JW1728
OM lipoprotein (SEC through IM), inserted in OM by LOL), Osmotically-inducible putative OsmE
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell inner membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
ECNA_ECOLI
P0ADB4
ecnA
b4410 JW5737
OM lipoprotein (SEC through IM), inserted in OM by LOL), Entericidin A EcnA
Outer Membrane Lipoprotein
I
N/A
Cell membrane; Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
ECNB_ECOLI
P0ADB7
ecnB

yjeU

b4411 JW4108
OM lipoprotein (SEC through IM), inserted in OM by LOL), Entericidin B EcnB
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane; Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
LPTE_ECOLI
P0ADC1
lptE

rlpB

b0641 JW0636
OM lipoprotein (SEC through IM), inserted in OM by LOL), LPS-assembly LptE
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
TAMA_ECOLI
P0ADE4
tamA

yftM ytfM

b4220 JW4179
OM b-barrel protein (SEC through IM, inserted in OM by BAM and TAM), Translocation and assembly module subunit TamA
Outer Membrane b-barrel protein
H
N/A
Cell outer membrane
Outer Membrane ??-barrel protein
 
 
SEC
 
BAM
yes
yes
YGFZ_ECOLI
P0ADE8
ygfZ

yzzW

b2898 JW2866
cytoplasmic & periplasmic protein (SEC through IM), tRNA-modifying YgfZ
Cytoplasmic, Periplasmic
A, G
N/A
Cytoplasm
Cytoplasmic (Experimental)
 
 
SEC
 
 
yes
yes
YIAF_ECOLI
P0ADK0
yiaF
b3554 JW5655
IM lipoprotein (SEC through IM, inserted in OM by LOL), YiaF
Inner Membrane Lipoprotein
E
Soluble IM Fraction
 
Membrane Lipoprotein
 
 
SEC
 
LOL
yes
yes
YIDQ_ECOLI
P0ADM4
yidQ
b3688 JW5633
IM lipoprotein (SEC through IM, inserted in OM by LOL), YidQ
Inner Membrane Lipoprotein
E
N/A
 
Outer membrane Lipoprotein(experimental)
 
 
SEC
 
LOL
yes
yes
YIDX_ECOLI
P0ADM6
yidX
b3696 JW5858
OM lipoprotein (SEC through IM, inserted in OM by LOL), YidX
Outer Membrane Lipoprotein
I
N/A
Membrane
Outer membrane Lipoprotein
 
 
SEC
 
LOL
no
yes
YIFL_ECOLI
P0ADN6
yifL
b4558 JW3781
OM lipoprotein (SEC through IM, inserted in OM by LOL), YifL
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane
Membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
YGGE_ECOLI
P0ADS6
yggE
b2922 JW2889
periplasmic protein (SEC through IM), YggE
Periplasmic
G
N/A
 
Periplasmic
 
 
SEC
 
 
yes
yes
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