mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

YJBT_ECOLI
|
A5A628
|
|
b4620
|
periplasmic protein (SEC through IM), YjbT
|
Periplasmic
|
G
|
N/A
|
|
-
|
|
|
SEC
|
|
|
no
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

RZOQ_ECOLI
|
C1P601
|
|
b4689 JW1545.1
|
IM lipoprotein (SEC through IM), inserted in OM by LOL), Putative RzoQ
|
Inner Membrane Lipoprotein
|
E
|
N/A
|
Cell membrane
|
-
|
|
|
SEC
|
|
LOL
|
no
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

YPDI_ECOLI
|
O32528
|
|
b2376 JW2373
|
OM lipoprotein (SEC through IM, inserted in OM by LOL), YpdI
|
Outer Membrane Lipoprotein
|
I
|
N/A
|
Cell membrane
|
Outer membrane Lipoprotein
|
|
|
SEC
|
|
LOL
|
no
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

YFJS_ECOLI
|
O52982
|
|
b2636 JW5921
|
IM lipoprotein (SEC through IM, inserted in OM by LOL), YfjS
|
Inner Membrane Lipoprotein
|
E
|
N/A
|
Cell inner membrane
|
Inner membrane lipoprotein
|
|
|
SEC
|
|
LOL
|
no
|
no
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

PPB_ECOLI
|
P00634
|
|
b0383 JW0374
|
periplasmic protein (SEC through IM), Alkaline phosphatase PhoA
|
Periplasmic
|
G
|
N/A
|
Periplasm
|
Periplasmic (Experimental)
|
|
|
SEC
|
DSBA
|
|
no
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

ASPG2_ECOLI
|
P00805
|
|
b2957 JW2924
|
periplasmic protein (SEC through IM), L-asparaginase 2 AnsB
|
Periplasmic
|
G
|
N/A
|
Periplasm
|
Periplasmic (Experimental)
|
|
|
SEC
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

AMPC_ECOLI
|
P00811
|
|
b4150 JW4111
|
periplasmic protein (SEC through IM), Beta-lactamase AmpC
|
Periplasmic
|
G
|
N/A
|
Periplasm
|
Periplasmic (Experimental)
|
|
|
SEC
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

ARAF_ECOLI
|
P02924
|
|
b1901 JW1889
|
periplasmic protein (SEC through IM), L-arabinose-binding periplasmic AraF
|
Periplasmic
|
G
|
N/A
|
Periplasm
|
Periplasmic (Experimental)
|
|
|
SEC
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

RBSB_ECOLI
|
P02925
|
|
b3751 JW3730
|
periplasmic protein (SEC through IM), Ribose import binding RbsB
|
Periplasmic
|
G
|
Soluble IM Fraction
|
Periplasm
|
Periplasmic (Experimental)
|
|
|
SEC
|
SKP
|
|
no
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

TOLC_ECOLI
|
P02930
|
tolC colE1-i mtcB mukA refI
|
b3035 JW5503
|
OM b-barrel protein (SEC through IM, inserted in OM by BAM), TolC
|
Outer Membrane b-barrel protein
|
H
|
Soluble IM Fraction
|
Cell outer membrane
|
Outer Membrane ??-barrel protein (Experimental)
|
|
SECB
|
SEC
|
SKP
|
BAM
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

OMPF_ECOLI
|
P02931
|
|
b0929 JW0912
|
OM b-barrel protein (SEC through IM, inserted in OM by BAM), OmpF
|
Outer Membrane b-barrel protein
|
H
|
Soluble IM Fraction
|
Cell outer membrane
|
Outer Membrane ??-barrel protein (Experimental)
|
|
TF
|
SEC
|
SKP,SURA
|
BAM
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

PHOE_ECOLI
|
P02932
|
|
b0241 JW0231
|
OM b-barrel protein (SEC through IM, inserted in OM by BAM), PhoE
|
Outer Membrane b-barrel protein
|
H
|
N/A
|
Cell outer membrane; Multi-pass membrane protein
|
Outer Membrane ??-barrel protein (Experimental)
|
|
|
SEC
|
|
BAM
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

LAMB_ECOLI
|
P02943
|
|
b4036 JW3996
|
OM b-barrel protein (SEC through IM, inserted in OM by BAM), Maltoporin LamB
|
Outer Membrane b-barrel protein
|
H
|
Soluble IM Fraction
|
Cell outer membrane
|
Outer Membrane ??-barrel protein (Experimental)
|
|
|
SEC
|
SKP,SURA,DEGP
|
BAM
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

MALM_ECOLI
|
P03841
|
|
b4037 JW3997
|
periplasmic protein (SEC through IM), Maltose operon periplasmic protein MalM
|
Periplasmic
|
G
|
N/A
|
Periplasm
|
Periplasmic (Experimental)
|
|
|
SEC
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

FIMA1_ECOLI
|
P04128
|
|
b4314 JW4277
|
Fimbrial extra-cellular peripheral OM protein (SEC through IM, chaperone usher export system over OM), Type-1 protein, A chain FimA
|
Peripheral outer membrane protein facing the extra-cellular space
|
F4
|
N/A
|
Fimbrium
|
Cell surface appendage (Experimental)
|
fimbriae
|
|
SEC
|
|
CU
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

LIVK_ECOLI
|
P04816
|
|
b3458 JW3423
|
periplasmic protein (SEC through IM), Leucine-specific-binding LivK
|
Periplasmic
|
G
|
N/A
|
Periplasm
|
Periplasmic (Experimental)
|
|
|
SEC
|
DSBA
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

NLPA_ECOLI
|
P04846
|
|
b3661 JW3635
|
IM lipoprotein (SEC through IM, inserted in OM by LOL), NlpA
|
Inner Membrane Lipoprotein
|
E
|
Soluble IM Fraction
|
Cell inner membrane; Lipid-anchor
|
Inner membrane lipoprotein
|
|
|
SEC
|
|
LOL
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

PTRA_ECOLI
|
P05458
|
|
b2821 JW2789
|
periplasmic protein (SEC through IM), Protease 3 PtrA
|
Periplasmic
|
G
|
N/A
|
Periplasm
|
Periplasmic(experimental)
|
|
|
SEC
|
SURA
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

FEPA_ECOLI
|
P05825
|
|
b0584 JW5086
|
OM b-barrel protein (SEC through IM, inserted in OM by BAM), Ferrienterobactin receptor FepA
|
Outer Membrane b-barrel protein
|
H
|
N/A
|
Cell outer membrane; Multi-pass membrane protein
|
Outer Membrane ??-barrel protein (Experimental)
|
|
|
SEC
|
SKP
|
BAM
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

BTUB_ECOLI
|
P06129
|
|
b3966 JW3938
|
OM b-barrel protein (SEC through IM, inserted in OM by BAM), Vitamin B12 transporter BtuB
|
Outer Membrane b-barrel protein
|
H
|
N/A
|
Cell outer membrane
|
Outer Membrane ??-barrel protein (Experimental)
|
|
|
SEC
|
SKP
|
BAM
|
no
|
yes
|