STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Peripheral Inner Membrane Proteome of E.coli K-12 (MG1655)

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Bernsel et al
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
SGRT_ECOLI
C1P5Z7
sgrT
b4662 JW0068.1
cytoplasmic peripheral IM protein, Putative inhibitor of glucose uptake transporter SgrT
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
-
 
 
 
 
 
no
yes
YOBI_ECOLI
C1P604
yobI
b4677 JW1850.1
cytoplasmic peripheral IM protein, YobI
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
-
 
 
 
 
 
no
yes
AZUC_ECOLI
C1P605
azuC
b4663 JW1891.1
cytoplasmic peripheral IM protein, AzuC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane
-
 
 
 
 
 
no
yes
YSHB_ECOLI
C1P620
yshB
b4686 JW3839.1
cytoplasmic peripheral IM protein, YshB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
-
 
 
 
 
 
no
yes
6PGD_ECOLI
P00350
gnd
b2029 JW2011
cytoplasmic peripheral IM protein, 6-phosphogluconate dehydrogenase, decarboxylating Gnd
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
FRDA_ECOLI
P00363
frdA
b4154 JW4115
cytoplasmic peripheral IM protein, Fumarate reductase flavosubunit FrdA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
DHNA_ECOLI
P00393
ndh
b1109 JW1095
cytoplasmic peripheral IM protein, NADH dehydrogenase Ndh
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
IM (predicted)
Cell membrane
Cytoplasmic
 
 
 
 
 
yes
yes
RIR1_ECOLI
P00452
nrdA
b2234 JW2228
cytoplasmic peripheral IM protein, Ribonucleoside-diphosphate reductase 1 subunit alpha NrdA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
TF
 
 
 
yes
yes
AAT_ECOLI
P00509
aspC
b0928 JW0911
cytoplasmic peripheral IM protein, Aspartate aminotransferase AspC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic (Experimental)
 
 
 
 
 
yes
yes
AK1H_ECOLI
P00561
thrA
b0002 JW0001
cytoplasmic peripheral IM protein, Bifunctional aspartokinase/homoserine dehydrogenase 1 ThrA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic (Experimental)
 
TF
 
 
 
yes
yes
AK2H_ECOLI
P00562
metL
b3940 JW3911
cytoplasmic peripheral IM protein, Bifunctional aspartokinase/homoserine dehydrogenase 2 MetL
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
RPOD_ECOLI
P00579
rpoD
b3067 JW3039
cytoplasmic nucleoid peripheral IM protein, RNA polymerase sigma factor RpoD
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
DPO1_ECOLI
P00582
polA
b3863 JW3835
cytoplasmic nucleoid peripheral IM protein, DNA polymerase I PolA
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
CAPP_ECOLI
P00864
ppc
b3956 JW3928
cytoplasmic peripheral IM protein, Phosphoenolpyruvate carboxylase Ppc
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
TRPE_ECOLI
P00895
trpE
b1264 JW1256
cytoplasmic peripheral IM protein, Anthranilate synthase component 1 TrpE
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
TRPGD_ECOLI
P00904
trpGD
b1263 JW1255
cytoplasmic peripheral IM protein, Bifunctional TrpG
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
 
Cytoplasmic (Experimental)
 
 
 
 
 
yes
yes
SYA_ECOLI
P00957
alaS
b2697 JW2667
cytoplasmic nucleoid peripheral IM protein, Alanine--tRNA ligase AlaS
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
A, N, F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
no
yes
SYM_ECOLI
P00959
metG
b2114 JW2101
cytoplasmic peripheral IM protein, Methionine--tRNA ligase MetG
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
SYGA_ECOLI
P00960
glyQ
b3560 JW3531
cytoplasmic peripheral IM protein, Glycine--tRNA ligase alpha subunit GlyQ
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
no
yes
SYGB_ECOLI
P00961
glyS
b3559 JW3530
cytoplasmic peripheral IM protein, Glycine--tRNA ligase beta subunit GlyS
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
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