STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
CFA_ECOLI
P0A9H7
cfa

cdfA

b1661 JW1653
cytoplasmic peripheral IM protein, Cyclopropane-fatty-acyl-phospholipid synthase Cfa
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
CSDA_ECOLI
Q46925
csdA

ygdJ

b2810 JW2781
cytoplasmic peripheral IM protein, Cysteine desulfurase CsdA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ISCS_ECOLI
P0A6B7
iscS

nuvC yfhO yzzO

b2530 JW2514
cytoplasmic peripheral IM protein, Cysteine desulfurase IscS
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
SUFS_ECOLI
P77444
sufS

csdB ynhB

b1680 JW1670
cytoplasmic peripheral IM protein, Cysteine desulfurase SufS
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
SUFE_ECOLI
P76194
sufE

ynhA

b1679 JW1669
cytoplasmic peripheral IM protein, Cysteine desulfuration SufE
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
CYSK_ECOLI
P0ABK5
cysK

cysZ

b2414 JW2407
cytoplasmic peripheral IM protein, Cysteine synthase A CysK
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
TF
 
 
 
yes
yes
CCMA_ECOLI
P33931
ccmA

yejW

b2201 JW5366
cytoplasmic peripheral IM protein, Cytochrome c biogenesis ATP-binding export CcmA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
AMPA_ECOLI
P68767
pepA

carP xerB

b4260 JW4217
cytoplasmic peripheral IM protein, Cytosol aminopeptidase PepA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ALSA_ECOLI
P32721
alsA

yjcW

b4087 JW4048
cytoplasmic peripheral IM protein, D-allose import ATP-binding AlsA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
DADA_ECOLI
P0A6J5
dadA

dadR

b1189 JW1178
cytoplasmic peripheral IM protein, D-amino acid dehydrogenase DadA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
TF
 
 
 
yes
yes
GATY_ECOLI
P0C8J6
gatY

yegF

b2096 JW5343
cytoplasmic peripheral IM protein, D-tagatose-1,6-bisphosphate aldolase subunit GatY
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
TF
 
 
 
yes
yes
GATZ_ECOLI
P0C8J8
gatZ
b2095 JW2082
cytoplasmic peripheral IM protein, D-tagatose-1,6-bisphosphate aldolase subunit GatZ
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
TF
 
 
 
yes
yes
DEOC_ECOLI
P0A6L0
deoC

dra thyR

b4381 JW4344
cytoplasmic peripheral IM protein, Deoxyribose-phosphate aldolase DeoC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
YIHI_ECOLI
P0A8H6
yihI
b3866 JW3837
cytoplasmic peripheral IM protein, Der GTPase-activating YihI
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
PYRD_ECOLI
P0A7E1
pyrD
b0945 JW0928
cytoplasmic peripheral IM protein, Dihydroorotate dehydrogenase PyrD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell membrane; Peripheral membrane protein
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
ILVD_ECOLI
P05791
ilvD
b3771 JW5605
cytoplasmic peripheral IM protein, Dihydroxy-acid dehydratase IlvD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
DLDH_ECOLI
P0A9P0
lpdA

lpd

b0116 JW0112
cytoplasmic peripheral IM protein, Dihydroyl dehydrogenase LpdA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
TF
 
 
 
yes
yes
ODP2_ECOLI
P06959
aceF
b0115 JW0111
cytoplasmic peripheral IM protein, Dihydroyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex AceF
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
TF
 
 
 
no
yes
ODO2_ECOLI
P0AFG6
sucB
b0727 JW0716
cytoplasmic peripheral IM protein, Dihydroyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex SucB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
TF
 
 
 
yes
yes
DPPD_ECOLI
P0AAG0
dppD
b3541 JW3510
cytoplasmic peripheral IM protein, Dipeptide transport ATP-binding DppD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
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