STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Bernsel et al
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
ARAG_ECOLI
P0AAF3
araG
b1900 JW1888
cytoplasmic peripheral IM protein, Arabinose import ATP-binding AraG
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ARTP_ECOLI
P0AAF6
artP
b0864 JW0848
cytoplasmic peripheral IM protein, Arginine transport ATP-binding ArtP
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
ARLY_ECOLI
P11447
argH
b3960 JW3932
cytoplasmic peripheral IM protein, Argininosuccinate lyase ArgH
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ASSY_ECOLI
P0A6E4
argG
b3172 JW3140
cytoplasmic peripheral IM protein, Argininosuccinate synthase ArgG
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ULAC_ECOLI
P69820
ulaC

ptxA sgaA yjfU
b4195 JW4153
cytoplasmic peripheral IM protein, Ascorbate-specific PTS system EIIA component UlaC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
no
yes
ULAB_ECOLI
P69822
ulaB

sgaB yjfT
b4194 JW4152
cytoplasmic peripheral IM protein, Ascorbate-specific PTS system EIIB component UlaB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
no
yes
ASNB_ECOLI
P22106
asnB
b0674 JW0660
cytoplasmic peripheral IM protein, Asparagine synthetase B AsnB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
TF
 
 
 
yes
yes
SYN_ECOLI
P0A8M0
asnS

tss
b0930 JW0913
cytoplasmic peripheral IM protein, Asparagine--tRNA ligase AsnS
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
TF
 
 
 
yes
yes
AAT_ECOLI
P00509
aspC
b0928 JW0911
cytoplasmic peripheral IM protein, Aspartate aminotransferase AspC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic (Experimental)
N/A
 
 
 
 
 
yes
yes
ASPA_ECOLI
P0AC38
aspA
b4139 JW4099
cytoplasmic peripheral IM protein, Aspartate ammonia-lyase AspA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
TF
 
 
 
yes
yes
SYD_ECOLI
P21889
aspS

tls
b1866 JW1855
cytoplasmic peripheral IM protein, Aspartate--tRNA ligase AspS
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
DHAS_ECOLI
P0A9Q9
asd

hom
b3433 JW3396
cytoplasmic peripheral IM protein, Aspartate-semialdehyde dehydrogenase Asd
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
IM (predicted-detected)
 
 
 
 
 
yes
yes
HIS1_ECOLI
P60757
hisG
b2019 JW2001
cytoplasmic peripheral IM protein, ATP phosphoribosyltransferase HisG
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ATPE_ECOLI
P0A6E6
atpC

papG uncC
b3731 JW3709
cytoplasmic peripheral IM protein, ATP synthase epsilon chain AtpC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
no
yes
ATPG_ECOLI
P0ABA6
atpG

papC uncG
b3733 JW3711
cytoplasmic peripheral IM protein, ATP synthase gamma chain AtpG
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
ATPA_ECOLI
P0ABB0
atpA

papA uncA
b3734 JW3712
cytoplasmic peripheral IM protein, ATP synthase subunit alpha AtpA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic
IM (predicted)
 
TF
 
 
 
no
yes
ATPB_ECOLI
P0ABB4
atpD

papB uncD
b3732 JW3710
cytoplasmic peripheral IM protein, ATP synthase subunit beta AtpD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane; Peripheral membrane protein
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
ATPD_ECOLI
P0ABA4
atpH

papE uncH
b3735 JW3713
cytoplasmic peripheral IM protein, ATP synthase subunit delta AtpH
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
no
yes
PFKA_ECOLI
P0A796
pfkA
b3916 JW3887
cytoplasmic peripheral IM protein, ATP-dependent 6-phosphofructokinase isozyme 1 PfkA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
HSLU_ECOLI
P0A6H5
hslU

htpI
b3931 JW3902
cytoplasmic peripheral IM protein, ATP-dependent protease ATPase subunit HslU
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
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