STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: E. coli K-12 / MG1655/ ATCC 47076 proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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E. coli K-12 / MG1655/ ATCC 47076 proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Uniprot
EchoLOCATION
Bernsel et al
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YEJF_ECOLI
P33916
yejF
b2180 JW2168
cytoplasmic peripheral IM protein, ABC transporter ATP-binding YejF
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
YHES_ECOLI
P63389
yheS
b3352 JW3315
cytoplasmic peripheral IM protein, ABC transporter ATP-binding YheS
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
TF
 
 
 
yes
yes
YNJD_ECOLI
P76909
ynjD
b1756 JW5286
cytoplasmic peripheral IM protein, ABC transporter ATP-binding YnjD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
YPHE_ECOLI
P77509
yphE
b2547 JW2531
cytoplasmic peripheral IM protein, ABC transporter ATP-binding YphE
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
YTFR_ECOLI
Q6BEX0
ytfR

ytfS
b4485 JW5752
cytoplasmic peripheral IM protein, ABC transporter ATP-binding YtfR
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
no
yes
ACKA_ECOLI
P0A6A3
ackA

ack
b2296 JW2293
cytoplasmic peripheral IM protein, Acetate kinase AckA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ACCA_ECOLI
P0ABD5
accA
b0185 JW0180
cytoplasmic peripheral IM protein, Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha AccA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
ACCD_ECOLI
P0A9Q5
accD

dedB usg
b2316 JW2313
cytoplasmic peripheral IM protein, Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta AccD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
ACSA_ECOLI
P27550
acs

yfaC
b4069 JW4030
cytoplasmic peripheral IM protein, Acetyl-coenzyme A synthetase Acs
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ARGB_ECOLI
P0A6C8
argB
b3959 JW5553
cytoplasmic peripheral IM protein, Acetylglutamate kinase ArgB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ARGE_ECOLI
P23908
argE
b3957 JW3929
cytoplasmic peripheral IM protein, Acetylornithine deacetylase ArgE
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ACNB_ECOLI
P36683
acnB

yacI yacJ
b0118 JW0114
cytoplasmic peripheral IM protein, Aconitate hydratase B AcnB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic (Experimental)
N/A
 
TF
 
 
 
yes
yes
ACP_ECOLI
P0A6A8
acpP
b1094 JW1080
cytoplasmic peripheral IM protein, Acyl carrier AcpP
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic (Experimental)
N/A
 
 
 
 
 
no
yes
YBGC_ECOLI
P0A8Z3
ybgC
b0736 JW0726
cytoplasmic peripheral IM protein, Acyl-CoA thioester hydrolase YbgC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cell inner membrane
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
ADD_ECOLI
P22333
add
b1623 JW1615
cytoplasmic peripheral IM protein, Adenosine deaminase Add
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
KAD_ECOLI
P69441
adk

dnaW plsA
b0474 JW0463
cytoplasmic peripheral IM protein, Adenylate kinase Adk
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic (Experimental)
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
PUR8_ECOLI
P0AB89
purB
b1131 JW1117
cytoplasmic peripheral IM protein, Adenylosuccinate lyase PurB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
PURA_ECOLI
P0A7D4
purA

adeK
b4177 JW4135
cytoplasmic peripheral IM protein, Adenylosuccinate synthetase PurA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Cytoplasm
Cytoplasmic
N/A
 
 
 
 
 
yes
yes
RFAF_ECOLI
P37692
rfaF

waaF
b3620 JW3595
cytoplasmic peripheral IM protein, ADP-heptose--LPS heptosyltransferase 2 RfaF
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic
Soluble protein detected in Inner Membrane Fraction
 
 
 
 
 
yes
yes
HLDD_ECOLI
P67910
hldD

htrM rfaD waaD
b3619 JW3594
cytoplasmic peripheral IM protein, ADP-L-glycero-D-manno-heptose-6-epimerase HldD
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
 
Cytoplasmic (Experimental)
N/A
 
 
 
 
 
yes
yes
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