mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

CSGF_ECOLI
|
P0AE98
|
|
b1038 JW1021
|
Curli related extra-cellular peripheral OM protein (SEC through IM), secreted over OM by curli), Curli production assembly/transport component CsgF
|
Peripheral outer membrane protein facing the extra-cellular space
|
F4
|
Cell outer membrane
|
Periplasmic (Experimental)
|
N/A
|
Curli
|
|
SEC
|
|
Curli
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

CSGA_ECOLI
|
P28307
|
|
b1042 JW1025
|
Curli related extra-cellular peripheral OM protein (SEC through IM), secreted over OM by curli), Major curlin subunit CsgA
|
Peripheral outer membrane protein facing the extra-cellular space
|
F4
|
Fimbrium
|
Cell surface appendage (Experimental)
|
N/A
|
Curli
|
|
SEC
|
|
Curli
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

CSGB_ECOLI
|
P0ABK7
|
|
b1041 JW1024
|
Curli related extra-cellular peripheral OM protein (SEC through IM), secreted over OM by curli), Minor curlin subunit CsgB
|
Peripheral outer membrane protein facing the extra-cellular space
|
F4
|
Fimbrium
|
Cell surface appendage (Experimental)
|
N/A
|
Curli
|
|
SEC
|
|
Curli
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

CSGG_ECOLI
|
P0AEA2
|
|
b1037 JW1020
|
Curli related OM lipoprotein & extra-cellular peripheral OM protein (SEC through IM), inserted in OM by LOL), Curli production assembly/transport component CsgG
|
Outer Membrane Lipoprotein, Peripheral outer membrane protein facing the extra-cellular space
|
I, F4
|
Cell membrane
|
Outer membrane Lipoprotein (Experimental)
|
N/A
|
Curli
|
|
SEC
|
|
LOL: Localization Of Lipoproteins
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

CSGE_ECOLI
|
P0AE95
|
|
b1039 JW1022
|
Curli related periplasmic protein (SEC through IM), Curli production assembly/transport component CsgE
|
Periplasmic
|
G
|
|
Periplasmic (Experimental)
|
N/A
|
Curli
|
|
SEC
|
SurA
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

SECM_ECOLI
|
P62395
|
|
b0097 JW5007
|
cytoplasmic & periplasmic protein (SEC through IM), Secretion monitor SecM
|
Cytoplasmic, Periplasmic
|
A, G
|
Cytoplasm; cytosol
|
Periplasmic (Experimental)
|
N/A
|
|
|
SEC
|
SurA
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

YGFZ_ECOLI
|
P0ADE8
|
|
b2898 JW2866
|
cytoplasmic & periplasmic protein (SEC through IM), tRNA-modifying YgfZ
|
Cytoplasmic, Periplasmic
|
A, G
|
Cytoplasm
|
Cytoplasmic (Experimental)
|
N/A
|
|
|
SEC
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

PMBA_ECOLI
|
P0AFK0
|
|
b4235 JW4194
|
cytoplasmic metalloprotease PmbA
|
Cytoplasmic
|
A
|
Cytoplasm
|
Cytoplasmic
|
N/A
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

TLDD_ECOLI
|
P0AGG8
|
|
b3244 JW3213
|
cytoplasmic metalloprotease TldD
|
Cytoplasmic
|
A
|
|
Cytoplasmic
|
N/A
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

ARCA_ECOLI
|
P0A9Q1
|
arcA cpxC dye fexA msp seg sfrA
|
b4401 JW4364
|
cytoplasmic nucleoid peripheral IM protein, Aerobic respiration control ArcA
|
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
|
A, N, F1
|
Cytoplasm
|
Cytoplasmic
|
N/A
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

SYA_ECOLI
|
P00957
|
|
b2697 JW2667
|
cytoplasmic nucleoid peripheral IM protein, Alanine--tRNA ligase AlaS
|
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
|
A, N, F1
|
Cytoplasm
|
Cytoplasmic
|
N/A
|
|
TF
|
|
|
|
no
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

RHLB_ECOLI
|
P0A8J8
|
|
b3780 JW3753
|
cytoplasmic nucleoid peripheral IM protein, ATP-dependent RNA helicase RhlB
|
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
|
A, N, F1
|
Cytoplasm
|
Cytoplasmic
|
N/A
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

PUTA_ECOLI
|
P09546
|
|
b1014 JW0999
|
cytoplasmic nucleoid peripheral IM protein, Bifunctional PutA
|
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
|
A, N, F1
|
|
Cytoplasmic
|
Soluble protein detected in Inner Membrane Fraction
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

CRP_ECOLI
|
P0ACJ8
|
|
b3357 JW5702
|
cytoplasmic nucleoid peripheral IM protein, cAMP-activated global transcriptional regulator Crp
|
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
|
A, N, F1
|
|
Cytoplasmic
|
N/A
|
|
TF
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

DNAA_ECOLI
|
P03004
|
|
b3702 JW3679
|
cytoplasmic nucleoid peripheral IM protein, Chromosomal replication initiator DnaA
|
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
|
A, N, F1
|
Cytoplasm
|
Cytoplasmic
|
N/A
|
|
|
|
|
|
no
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

MUKB_ECOLI
|
P22523
|
|
b0924 JW0907
|
cytoplasmic nucleoid peripheral IM protein, Chromosome partition MukB
|
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
|
A, N, F1
|
Cytoplasm; nucleoid
|
Cytoplasmic
|
N/A
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

MUKE_ECOLI
|
P22524
|
|
b0923 JW0906
|
cytoplasmic nucleoid peripheral IM protein, Chromosome partition MukE
|
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
|
A, N, F1
|
Cytoplasm; nucleoid
|
Cytoplasmic
|
N/A
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

MUKF_ECOLI
|
P60293
|
|
b0922 JW0905
|
cytoplasmic nucleoid peripheral IM protein, Chromosome partition MukF
|
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
|
A, N, F1
|
Cytoplasm; nucleoid
|
Cytoplasmic
|
N/A
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

CSGD_ECOLI
|
P52106
|
|
b1040 JW1023
|
cytoplasmic nucleoid peripheral IM protein, CsgBAC operon transcriptional regulatory protein CsgD
|
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
|
A, N, F1
|
Cell inner membrane
|
Cytoplasmic
|
N/A
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

GYRA_ECOLI
|
P0AES4
|
|
b2231 JW2225
|
cytoplasmic nucleoid peripheral IM protein, DNA gyrase subunit A GyrA
|
Cytoplasmic, Nucleoid, Peripheral inner membrane protein facing the cytoplasm
|
A, N, F1
|
Cytoplasm
|
Cytoplasmic
|
N/A
|
|
TF
|
|
|
|
yes
|
yes
|