STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

View: Disulfideome of E.coli K-12 (MG1655) proteome  Export to Excel  Export to HTML  Export to XML  Export to CSV  

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Disulfideome of E.coli K-12 (MG1655) proteome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Bernsel et al
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
RIR1_ECOLI
P00452
nrdA

dnaF
b2234 JW2228
cytoplasmic peripheral IM protein, Ribonucleoside-diphosphate reductase 1 subunit alpha NrdA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
TF
 
 
 
yes
yes
AK2H_ECOLI
P00562
metL

metM
b3940 JW3911
cytoplasmic peripheral IM protein, Bifunctional aspartokinase/homoserine dehydrogenase 2 MetL
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
SYGA_ECOLI
P00960
glyQ

glyS(A)
b3560 JW3531
cytoplasmic peripheral IM protein, Glycine--tRNA ligase alpha subunit GlyQ
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
TF
 
 
 
no
yes
PT1_ECOLI
P08839
ptsI
b2416 JW2409
cytoplasmic peripheral IM protein, Phosphoenolpyruvate-phosphotransferase PtsI
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
GLTB_ECOLI
P09831
gltB

aspB
b3212 JW3179
cytoplasmic peripheral IM protein, Glutamate synthase (NADPH) large chain GltB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
no
yes
HSLO_ECOLI
P0A6Y5
hslO

yrfI
b3401 JW5692
cytoplasmic peripheral IM protein, 33 kDa chaperonin HslO
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
IM (predicted)
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
NAGB_ECOLI
P0A759
nagB

glmD
b0678 JW0664
cytoplasmic peripheral IM protein, Glucosamine-6-phosphate deaminase NagB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
IM (predicted)
 
Cytoplasmic
 
 
 
 
 
yes
yes
RECA_ECOLI
P0A7G6
recA

lexB recH rnmB tif umuB zab
b2699 JW2669
cytoplasmic peripheral IM protein, RecA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
TF
 
 
 
no
yes
TPX_ECOLI
P0A862
tpx

yzzJ
b1324 JW1317
cytoplasmic peripheral IM protein, Thiol peroxidase Tpx
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Periplasm
Periplasmic (Experimental)
 
 
 
 
 
yes
yes
ALF1_ECOLI
P0A991
fbaB

dhnA
b2097 JW5344
cytoplasmic peripheral IM protein, Fructose-bisphosphate aldolase class 1 FbaB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
no
yes
G3P1_ECOLI
P0A9B2
gapA
b1779 JW1768
cytoplasmic peripheral IM protein, Glyceraldehyde-3-phosphate dehydrogenase A GapA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic
 
TF
 
 
 
yes
yes
ACEA_ECOLI
P0A9G6
aceA

icl
b4015 JW3975
cytoplasmic peripheral IM protein, Isocitrate lyase AceA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
DLDH_ECOLI
P0A9P0
lpdA

lpd
b0116 JW0112
cytoplasmic peripheral IM protein, Dihydroyl dehydrogenase LpdA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
Cytoplasm
Cytoplasmic (Experimental)
 
TF
 
 
 
yes
yes
THIO_ECOLI
P0AA25
trxA

fipA tsnC
b3781 JW5856
cytoplasmic peripheral IM protein, Thioredoxin 1 TrxA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
TF
 
 
 
no
yes
FUMA_ECOLI
P0AC33
fumA
b1612 JW1604
cytoplasmic peripheral IM protein, Fumarate hydratase class I, aerobic FumA
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
GLRX3_ECOLI
P0AC62
grxC

yibM
b3610 JW3585
cytoplasmic peripheral IM protein, Glutaredoxin 3 GrxC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
ISCU_ECOLI
P0ACD4
iscU

nifU yfhN
b2529 JW2513
cytoplasmic peripheral IM protein, Iron-sulfur cluster assembly scaffold IscU
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
 
Cytoplasmic
 
 
 
 
 
yes
yes
AMPH_ECOLI
P0AD70
ampH

yaiH
b0376 JW5052
cytoplasmic peripheral IM protein (SEC through IM), D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cell inner membrane
Periplasmic
 
 
 
SURA
 
yes
yes
YGIB_ECOLI
P0ADT2
ygiB
b3037 JW5927
cytoplasmic peripheral IM protein, UPF0441 YgiB
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
Soluble IM Fraction
 
Cytoplasmic
 
 
 
 
 
yes
yes
AHPC_ECOLI
P0AE08
ahpC
b0605 JW0598
cytoplasmic peripheral IM protein, Alkyl hydroperoxide reductase C AhpC
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
A, F1
N/A
Cytoplasm
Cytoplasmic
 
 
 
 
 
yes
yes
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