mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

RIR1_ECOLI
|
P00452
|
|
b2234 JW2228
|
cytoplasmic peripheral IM protein, Ribonucleoside-diphosphate reductase 1 subunit alpha NrdA
|
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
|
A, F1
|
N/A
|
|
Cytoplasmic
|
|
TF
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

AK2H_ECOLI
|
P00562
|
|
b3940 JW3911
|
cytoplasmic peripheral IM protein, Bifunctional aspartokinase/homoserine dehydrogenase 2 MetL
|
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
|
A, F1
|
N/A
|
|
Cytoplasmic
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

PPB_ECOLI
|
P00634
|
|
b0383 JW0374
|
periplasmic protein (SEC through IM), Alkaline phosphatase PhoA
|
Periplasmic
|
G
|
N/A
|
Periplasm
|
Periplasmic (Experimental)
|
|
|
SEC
|
DSBA
|
|
no
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Family Domains
Topology on the inner membrane
Protein Hydrodynamics
Protein Solubility

LEP_ECOLI
|
P00803
|
|
b2568 JW2552
|
integral IM protein (SEC-YidC in IM), Signal peptidase I LepB
|
Integral Inner Membrane
|
B
|
IM (predicted)
|
Cell inner membrane
|
Integral Membrane Protein
|
|
|
SEC-YidC
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

ASPG2_ECOLI
|
P00805
|
|
b2957 JW2924
|
periplasmic protein (SEC through IM), L-asparaginase 2 AnsB
|
Periplasmic
|
G
|
N/A
|
Periplasm
|
Periplasmic (Experimental)
|
|
|
SEC
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

SYI_ECOLI
|
P00956
|
|
b0026 JW0024
|
cytoplasmic protein, Isoleucine--tRNA ligase IleS
|
Cytoplasmic
|
A
|
N/A
|
Cytoplasm
|
Cytoplasmic
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

SYGA_ECOLI
|
P00960
|
|
b3560 JW3531
|
cytoplasmic peripheral IM protein, Glycine--tRNA ligase alpha subunit GlyQ
|
Cytoplasmic, Peripheral inner membrane protein facing the cytoplasm
|
A, F1
|
N/A
|
Cytoplasm
|
Cytoplasmic
|
|
TF
|
|
|
|
no
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

LAMB_ECOLI
|
P02943
|
|
b4036 JW3996
|
OM b-barrel protein (SEC through IM, inserted in OM by BAM), Maltoporin LamB
|
Outer Membrane b-barrel protein
|
H
|
Soluble IM Fraction
|
Cell outer membrane
|
Outer Membrane ??-barrel protein (Experimental)
|
|
|
SEC
|
SKP,SURA,DEGP
|
BAM
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

FIMA1_ECOLI
|
P04128
|
|
b4314 JW4277
|
Fimbrial extra-cellular peripheral OM protein (SEC through IM, chaperone usher export system over OM), Type-1 protein, A chain FimA
|
Peripheral outer membrane protein facing the extra-cellular space
|
F4
|
N/A
|
Fimbrium
|
Cell surface appendage (Experimental)
|
fimbriae
|
|
SEC
|
|
CU
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

TYRB_ECOLI
|
P04693
|
|
b4054 JW4014
|
cytoplasmic protein, Aromatic-amino-acid aminotransferase TyrB
|
Cytoplasmic
|
A
|
N/A
|
Cytoplasm
|
Cytoplasmic
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

LIVK_ECOLI
|
P04816
|
|
b3458 JW3423
|
periplasmic protein (SEC through IM), Leucine-specific-binding LivK
|
Periplasmic
|
G
|
N/A
|
Periplasm
|
Periplasmic (Experimental)
|
|
|
SEC
|
DSBA
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

FEPA_ECOLI
|
P05825
|
|
b0584 JW5086
|
OM b-barrel protein (SEC through IM, inserted in OM by BAM), Ferrienterobactin receptor FepA
|
Outer Membrane b-barrel protein
|
H
|
N/A
|
Cell outer membrane; Multi-pass membrane protein
|
Outer Membrane ??-barrel protein (Experimental)
|
|
|
SEC
|
SKP
|
BAM
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

BTUE_ECOLI
|
P06610
|
|
b1710 JW1700
|
cytoplasmic protein, Thioredoxin/glutathione peroxidase BtuE
|
Cytoplasmic
|
A
|
N/A
|
Periplasm
|
Cytoplasmic
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

GSHR_ECOLI
|
P06715
|
|
b3500 JW3467
|
cytoplasmic protein, Glutathione reductase Gor
|
Cytoplasmic
|
A
|
N/A
|
Cytoplasm
|
Cytoplasmic
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

FHUA_ECOLI
|
P06971
|
|
b0150 JW0146
|
OM b-barrel protein (SEC through IM, inserted in OM by BAM), Ferrichrome transporter/phage receptor FhuA
|
Outer Membrane b-barrel protein
|
H
|
N/A
|
Cell outer membrane
|
Outer Membrane ??-barrel protein (Experimental)
|
|
SECB
|
SEC
|
SURA,SKP
|
BAM
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

USHA_ECOLI
|
P07024
|
|
b0480 JW0469
|
periplasmic protein (SEC through IM), UshA
|
Periplasmic
|
G
|
Soluble IM Fraction
|
Periplasm
|
Periplasmic (Experimental)
|
|
|
SEC
|
|
|
no
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

PPA_ECOLI
|
P07102
|
|
b0980 JW0963
|
periplasmic protein (SEC through IM), AppA
|
Periplasmic
|
G
|
N/A
|
Periplasm
|
Periplasmic (Experimental)
|
|
|
SEC
|
DSBC
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

TDH_ECOLI
|
P07913
|
|
b3616 JW3591
|
cytoplasmic protein, L-threonine 3-dehydrogenase Tdh
|
Cytoplasmic
|
A
|
IM (predicted)
|
Cytoplasm
|
Cytoplasmic
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

ILVB_ECOLI
|
P08142
|
|
b3671 JW3646
|
cytoplasmic protein, Acetolactate synthase isozyme 1 large subunit IlvB
|
Cytoplasmic
|
A
|
N/A
|
|
Cytoplasmic
|
|
|
|
|
|
yes
|
yes
|
mRNA Expression
mRNA abundance (Taniguchi 2010)
Protein Existence
Mass spectrometry experiments
Protein abundance/solubility
Protein abundance (Taniguchi 2010)
Protein Hydrodynamics
Protein Solubility

FIMF_ECOLI
|
P08189
|
|
b4318 JW4281
|
Fimbrial extra-cellular peripheral OM protein (SEC through IM, chaperone usher export system over OM), FimF
|
Peripheral outer membrane protein facing the extra-cellular space
|
F4
|
N/A
|
Fimbrium
|
Cell surface appendage (Experimental)
|
fimbriae
|
|
SEC
|
|
CU
|
no
|
yes
|