STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

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E.coli K-12 (MG1655) Exportome

(mouse over and click on the one letter topology symbols to see which proteins of this specific subproteome are localized in each location)

Bacterial cell cartoon of sub-cellular locations


Protein ID
(Uniprot)
Accession
(Uniprot)
Gene Name
(Uniprot)
Order
Locus Name
Protein Name
(STEPdb)
Full Name
Symbol
Bernsel et al
Uniprot
EchoLOCATION
Extracellular Appendage
First Level
Targeting
Chaperoning
First Level
Secretion
System
Second Level
Targeting
Chaperoning
Second Level
Secretion
System
K-12 Core
Proteome
(yes/no)
K-12 Basic
Proteome
(yes/no)
YPDI_ECOLI
O32528
ypdI
b2376 JW2373
OM lipoprotein (SEC through IM, inserted in OM by LOL), YpdI
Outer Membrane Lipoprotein
I
N/A
Cell membrane
Outer membrane Lipoprotein
 
 
SEC
 
LOL
no
yes
YFIB_ECOLI
P07021
yfiB
b2605 JW2586
OM lipoprotein (SEC through IM), inserted in OM by LOL), Putative YfiB
Outer Membrane Lipoprotein
I
N/A
Cell membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
FLGH_ECOLI
P0A6S0
flgH

fla FVIII flaY
b1079 JW5153
Flagellar OM lipoprotein (SEC through IM), inserted in OM by LOL), L-ring FlgH
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane
Outer membrane Lipoprotein (Experimental)
flagellum
 
SEC
 
LOL
yes
yes
BLC_ECOLI
P0A901
blc

yjeL
b4149 JW4110
OM lipoprotein (SEC through IM, inserted in OM by LOL), Blc
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane; Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
BAMC_ECOLI
P0A903
bamC

dapX nlpB
b2477 JW2462
OM lipoprotein (SEC through IM, inserted in OM by LOL), assembly factor BamC
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
SLYB_ECOLI
P0A905
slyB
b1641 JW1633
OM lipoprotein (SEC through IM, inserted in OM by LOL), SlyB
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
PAL_ECOLI
P0A912
pal

excC
b0741 JW0731
OM lipoprotein (SEC through IM), inserted in OM by LOL), PG-associated Pal
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
WZA_ECOLI
P0A930
wza
b2062 JW2047
OM lipoprotein & extra-cellular peripheral OM protein (SEC through IM), inserted in OM by LOL), Putative polysaccharide export Wza
Outer Membrane Lipoprotein, Peripheral outer membrane protein facing the extra-cellular space
I, F4
N/A
Cell outer membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
GFCE_ECOLI
P0A932
gfcE

yccZ
b0983 JW0966
OM lipoprotein (SEC through IM), inserted in OM by LOL), Putative polysaccharide export GfcE
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
MLTA_ECOLI
P0A935
mltA

mlt ygdM
b2813 JW2784
OM lipoprotein (SEC through IM), inserted in OM by LOL), Membrane-bound lytic murein transglycosylase A MltA
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane; Lipid-anchor
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
BAME_ECOLI
P0A937
bamE

smpA
b2617 JW2598
OM lipoprotein (SEC through IM, inserted in OM by LOL), assembly factor BamE
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane
Outer membrane Lipoprotein
 
 
SEC
 
LOL
yes
yes
YEAY_ECOLI
P0AA91
yeaY
b1806 JW1795
OM lipoprotein (SEC through IM, inserted in OM by LOL), YeaY
Outer Membrane Lipoprotein
I
N/A
Cell membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YCEB_ECOLI
P0AB26
yceB
b1063 JW1050
OM lipoprotein (SEC through IM, inserted in OM by LOL), YceB
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YCEK_ECOLI
P0AB31
yceK
b1050 JW5151
OM lipoprotein (SEC through IM, inserted in OM by LOL), YceK
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
no
yes
LPOB_ECOLI
P0AB38
lpoB

ycfM
b1105 JW5157
OM lipoprotein (SEC through IM), inserted in OM by LOL), Penicillin-binding activator LpoB
Outer Membrane Lipoprotein
I
N/A
Cell outer membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
BAMD_ECOLI
P0AC02
bamD

yfiO
b2595 JW2577
OM lipoprotein (SEC through IM, inserted in OM by LOL), assembly factor BamD
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell outer membrane
Outer membrane Lipoprotein(experimental)
 
 
SEC
 
LOL
yes
yes
YDBJ_ECOLI
P0ACW2
ydbJ
b4529 JW5215
OM lipoprotein (SEC through IM, inserted in OM by LOL), YdbJ
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein
 
 
SEC
 
LOL
no
yes
YFHG_ECOLI
P0AD44
yfhG
b2555 JW2539
OM lipoprotein (TAT-SEC through IM, inserted in OM by LOL), YfhG
Outer Membrane Lipoprotein
I
N/A
 
Outer membrane Lipoprotein
 
 
TAT,SEC
 
LOL
yes
yes
NLPD_ECOLI
P0ADA3
nlpD
b2742 JW2712
OM lipoprotein (SEC through IM), inserted in OM by LOL), Murein hydrolase activator NlpD
Outer Membrane Lipoprotein
I
N/A
Cell inner membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
YAJG_ECOLI
P0ADA5
yajG
b0434 JW0424
OM lipoprotein (SEC through IM, inserted in OM by LOL), YajG
Outer Membrane Lipoprotein
I
Soluble IM Fraction
Cell membrane
Outer membrane Lipoprotein (Experimental)
 
 
SEC
 
LOL
yes
yes
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