STEPdb: Sub-cellular Topologies of E.coli Polypeptides.

Table: E.coli EPEC (O127:H6) proteome Export to Excel Export to HTML Export to XML Export to CSV

E.coli EPEC (O127:H6) proteome

Accession (Uniprot)

Protein ID (Uniprot)

Protein Name (STEPdb)

Gene Names (Uniprot)

Subcellular Location (Uniprot)

Mass (Da)

Protein Length

Protein Existence (Uniprot)

B7UK43

RL4_ECO27

50S ribosomal protein L4

rplD E2348C_3582

22.087

201

Inferred from homology

B7UK32

RL5_ECO27

50S ribosomal protein L5

rplE E2348C_3571

20.302

179

Inferred from homology

B7UK29

RL6_ECO27

50S ribosomal protein L6

rplF E2348C_3568

18.904

177

Inferred from homology

B7UPE1

RL7_ECO27

50S ribosomal protein L7/L12

rplL E2348C_4293

12.295

121

Inferred from homology

B7UQL2

RL9_ECO27

50S ribosomal protein L9

rplI E2348C_4526

15.769

149

Inferred from homology

B7UMV1

RLMC_ECO27

23S rRNA (uracil(747)-C(5))-methyltransferase RlmC (EC 2.1.1.189) (23S rRNA(m5U747)-methyltransferase)

rlmC rumB E2348C_0856

41.943

375

Inferred from homology

B7UJ72

RLME_ECO27

Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase)

rlmE ftsJ rrmJ E2348C_3458

Cytoplasm

23.335

209

Inferred from homology

B7UM03

RLMF_ECO27

Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.181) (23S rRNA mA1618 methyltransferase) (rRNA adenine N-6-methyltransferase)

rlmF E2348C_0759

Cytoplasm

34.241

308

Inferred from homology

B7UKS6

RLMH_ECO27

Ribosomal RNA large subunit methyltransferase H (EC 2.1.1.177) (23S rRNA (pseudouridine1915-N3)-methyltransferase) (23S rRNA m3Psi1915 methyltransferase) (rRNA (pseudouridine-N3-)-methyltransferase RlmH)

rlmH E2348C_0536

Cytoplasm

17.341

155

Inferred from homology

B7UN46

RLMI_ECO27

Ribosomal RNA large subunit methyltransferase I (EC 2.1.1.191) (23S rRNA m5C1962 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RlmI)

rlmI E2348C_0953

Cytoplasm

44.406

396

Inferred from homology

B7UHM2

RLMM_ECO27

Ribosomal RNA large subunit methyltransferase M (EC 2.1.1.186) (23S rRNA (cytidine2498-2'-O)-methyltransferase) (23S rRNA 2'-O-ribose methyltransferase RlmM)

rlmM E2348C_3073

Cytoplasm

41.878

366

Inferred from homology

B7UGW3

RLMN_ECO27

Dual-specificity RNA methyltransferase RlmN (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 met

rlmN E2348C_2800

Cytoplasm

43.086

384

Inferred from homology

B7UR96

RNB_ECO27

Exoribonuclease 2 (EC 3.1.13.1) (Exoribonuclease II) (RNase II) (Ribonuclease II)

rnb E2348C_1480

Cytoplasm

72.417

644

Inferred from homology

B7UH07

RNC_ECO27

Ribonuclease 3 (EC 3.1.26.3) (Ribonuclease III) (RNase III)

rnc E2348C_2844

Cytoplasm

25.55

226

Inferred from homology

B7UH66

RNFH_ECO27

Protein RnfH

rnfH E2348C_2906

10.815

Inferred from homology

B7UJ84

RNH2_ECO27

Ribonuclease HII (RNase HII) (EC 3.1.26.4)

rnhB E2348C_0188

Cytoplasm

21.482

198

Inferred from homology

B7UJB0

RNH_ECO27

Ribonuclease H (RNase H) (EC 3.1.26.4)

rnhA E2348C_0214

Cytoplasm

17.578

155

Inferred from homology

B7UMH1

RNPA_ECO27

Ribonuclease P protein component (RNase P protein) (RNaseP protein) (EC 3.1.26.5) (Protein C5)

rnpA E2348C_4015

13.789

119

Inferred from homology

B7UM50

RNPH_ECO27

Ribonuclease PH (RNase PH) (EC 2.7.7.56) (tRNA nucleotidyltransferase)

rph E2348C_3892

25.298

238

Inferred from homology

B7UGW2

RODZ_ECO27

Cytoskeleton protein RodZ

rodZ E2348C_2799

Cell inner membrane, Single-pass type II membrane protein, Note=Forms helical filaments along the long axis of the cell.

36.127

335

Inferred from homology